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Society for Neuroscience
Databases having Knowledge as DB Category
 Name/ Description/ URL
1
Allen Brain Atlas 
 Map of the Mouse Brain
 http://www.brain-map.org
2
Allen Institute Human Cortex Study 
 Gene expression in the human cortex
 http://humancortex.alleninstitute.org
3
Allen Institute Sleep Study 
 Gene expression in the mouse brain in response to sleep deprivation, sleep-wake, or time of day.
 http://sleep.alleninstitute.org
4
ALZForum 
 Alzheimer Research Forum
 http://www.alzforum.org/
5
Alzheimer's Research Center  
 Resource to disseminate information related to Alzheimer's Disease
 http://www.mcg.edu/centers/alz
6
BAMS 
 Brain Architecture Management System (BAMS)
 http://brancusi.usc.edu/bkms
7
BCDB 
 Brain Collection Database
 http://www.brains.rad.msu.edu
8
BIRN 
 Biomedical Informatics Research Network
 http://www.nbirn.net
9
BIRN-CC 
 BIRN Coordinating Center
 http://www.nbirn.net/TestBeds/CoordinatingCenter/index.htm
10
Brain Architecture Center  
 Vertebrate Nervous system (Humans and Primates)
 http://brancusi.usc.edu/
11
Brain Atlases 
 Brain atlases
 http://brainmaps.org
12
BrainInfo 
 BrainInfo
 http://braininfo.rprc.washington.edu
13
BrainMap 
 BrainMap
 http://brainmap.org/
14
BrainMaps.org 
 High Resolution Primate Brain atlases integrated with database and search features
 http://brainmaps.org
15
BrainPharm  
 Resource in SenseLab related to pharmacological information related to Alzheimer's Disease, Parkinson's Disease and Epilepsy
 http://senselab.med.yale.edu/BrainPharm/
16
BrainWeb 
 BrainWeb
 http://www.bic.mni.mcgill.ca/brainweb/
17
CoCoMac 
 Collation of Connectivity data on the Macaque brain
 http://cocomac.org/home.htm
18
Conexus 
 Conexus
 http://mallorn.ucdavis.edu/conexus/
19
Coriell Cell Repositories  
 Resource for distribution of cell cultures and DNA from cell cultures
 http://ccr.coriell.org/ccr/
20
EMAP 
 EMAP. Edinburgh mouse atlas project
 http://genex.hgu.mrc.ac.uk/
21
FlyBrain 
 FLYBRAIN
 http://www.flybrain.org/
22
FMA 
 Foundational Model of Anatomy
 http://sig.biostr.washington.edu/projects/fm/
23
FMRIDC 
 The fMRI Data Center
 http://www.fmridc.org
24
FunctionBIRN 
 Function BIRN
 http://www.nbirn.net/TestBeds/Function/index.htm
25
GeneNetwork 
 GeneNetwork is a suite of connected bioinformatic tools and data resources, including genotypes, SNPs, gene expression, anatomical, and behavioral phenotypes for many strains of mice and rats and several CNS regions.
 http://www.genenetwork.org
26
GEO 
 GEO - Gene Expression Omnibus /NCBI
 http://www.ncbi.nlm.nih.gov/geo/
27
gPDB 
 Database related to GPCRs
 http://bioinformatics.biol.uoa.gr/gpDB/
28
HBP 
 Human Brain Project
 http://www.nimh.nih.gov/neuroinformatics/index.cfm
29
Hereditary Hearing Loss Homepage 
 Genetics of hereditary hearing impairment
 http://www.uia.ac.be/dnalab/hhh/
30
HUPO BPP  
 Human Brain Proteome Project
 http://www.hbpp.org/
31
ImageBank  
 A Bioscience Image Source
 http://bio.ltsn.ac.uk/imagebank/
32
INDP 
 Identified Neuron Database Project
 http://n002bsel.bios.uic.edu/
33
IUPHAR-DB 
 IUPHAR Database of Receptors and Ion Channels
 http://www.iuphar-db.org
34
JNeurosci Keywords 
 Journal of Neuroscience keywords
 http://www.jneurosci.org
35
Ki-Database 
 Database of Drug-Target Interaction
 http://pdsp.med.unc.edu
36
LGICdb 
 Ligand Gated Ion Channel database (LGICdb)
 http://www.ebi.ac.uk/compneur-srv/LGICdb/
37
MBL 
 The Mouse Brain Library
 http://mbl.org
38
MGI 
 Mouse Genome Informatics
 http://www.informatics.jax.org/
39
MitoMap 
 Human Mitochondrial Genome Database
 http://www.mitomap.org/
40
ModelDB 
 Neuronal and Network Models
 http://senselab.med.yale.edu/senselab/ModelDB/
41
MorphBIRN 
 Morphometry BIRN
 http://www.nbirn.net/TestBeds/Morphometry/index.htm
42
Mouse BIRN 
 Multi-Scale Mouse Models of Disease Test Bed
 http://www.nbirn.net/TestBeds/Mouse/index.htm
43
National Institute of Neurological Disorders and Stroke  
 Comprehensive resource for information related to neurological disorders
 http://www.ninds.nih.gov/
44
National Simulation Resource 
  The National Simulation Resource for Transport, Metabolism and Reaction
 http://nsr.bioeng.washington.edu/PLN/
45
NEIBank 
 National Eye Institute Bank
 http://neibank.nei.nih.gov
46
Nervenet 
 Mouse Neurogenetics Center
 http://www.nervenet.org
47
NeuroHomology Database 
 Data on Interspecies Similarities
 http://brancusi.usc.edu/scripts/webmerger.exe?/database/homologies-main.html
48
Neuromice 
 Neuromice.org
 http://www.neuromice.org
49
NeuroMorpho.Org 
 Inventory of digital reconstructions of neuronal morphology
 http://www.neuromorpho.org/neuroMorpho/
50
NeuronBank 
 NeuronBank is a Neuromics tool for cataloging identified neurons or neuronal types and their synaptic connections. Knowledge for different species is represented as a federation of branches
 http://NeuronBank.org
51
NeuroScholar 
 NeuroScholar
 http://www.neuroscholar.org
52
Neuroterrain 
 Neuroinformatic Tools for Vertebrate Brain Mapping
 http://www.neuroterrain.org/
53
NINDS NIMH Microarray Enterprise Manager 
 Microarray data files from experiments
 http://arrayconsortium.tgen.org
54
NIP 
 The Neuroinformatics Portal Pilot
 http://www.neuroinf.de
55
NITRC 
 Neuroimaging Informatics Tools and Resources Clearinghouse.
 http://nitrc.nih.gov
56
ODE 
 Ontological Discovery Environment
 http://www.ontologicaldiscovery.org
57
PhosphoSite 
 Protein phosphorylation bioinformatics resource
 http://www.phosphosite.org
58
PIR  
 Protein Information Resource
 http://pir.georgetown.edu/
59
Polygenic Pathways 
 Summarizes genes associated with Alzheimer's disease, Bipolar disorder or schizophrenia
 http://www.polygenicpathways.co.uk
60
PPID 
 Protein-Protein Interaction Database
 http://www.PPID.org
62
SenseLab 
 Integration of multidisciplinary sensory data
 http://senselab.med.yale.edu
63
SfN Annual Meeting Themes and Topics 
 Society for Neuroscience Annual Meeting Themes and Topics
 http://www.sfn.org/am2006/
64
SumsDB 
 Surface Management System Database
 http://sumsdb.wustl.edu:8081/sums/index.jsp
65
Synapse Web 
 SynapseWeb
 http://synapses.clm.utexas.edu
66
SynDB 
 Synapse Database
 http://syndb.cbi.pku.edu.cn/
67
Talairach Daemon 
 Talairach Daemon
 http://ric.uthscsa.edu/resources/talairachdaemon/talairachdaemon.html
68
TNAMS 
 Translating Neurodevelopment Across Mammalian Species
 http://www.translatingtime.net
69
Virtual Hospital 
 Virtual Hospital Brain Anatomy Info
 http://www.vh.org/adult/provider/anatomy/BrainAnatomy/BrainAnatomy.html
70
Visiome 
 Visiome Platform
 http://platform.visiome.org/
71
Washington University Inner Ear Protein Database 
 Inner Ear Proteins in Health and Disease
 http://oto.wustl.edu/thc/innerear2d.htm
72
Whole Brain Atlas 
 Database of Normal and Abnormal Brain Images
 http://www.med.harvard.edu/AANLIB/home.html
73
Wormbase 
 WormBase
 http://www.wormbase.org
74
XANAT 
 XANAT
 http://redwood.ucdavis.edu/bruno/xanat
75
Zebrafish Information Network  
 Zerbafish Genomic and Genetic Information Resource
 http://zfin.org/cgi-bin/webdriver?MIval=aa-ZDB_home.apg



 
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