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Databases having Experimental data as DB Category
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 Name/ Description/ URL
1
a7 Database 
 Biological aspects of alpha7 subunit of the nicotinic acetylcholine receptor
 http://www.lgics.org/a7db/
2
ABCD 
 Avian Brain Circuitry Database
 http://www.behav.org/abcd
3
Allen Brain Atlas 
 Map of the Mouse Brain
 http://www.brain-map.org
4
Allen Institute Human Cortex Study 
 Gene expression in the human cortex
 http://humancortex.alleninstitute.org
5
Allen Institute Sleep Study 
 Gene expression in the mouse brain in response to sleep deprivation, sleep-wake, or time of day.
 http://sleep.alleninstitute.org
6
Alzheimer's Research Center  
 Resource to disseminate information related to Alzheimer's Disease
 http://www.mcg.edu/centers/alz
7
Array Express-European Bioinformatics Institute  
 Public Repository of Microarray Data
 http://www.ebi.ac.uk/arrayexpress/
8
ASTD 
 Audimotor Spike Train Database
 http://repositories.cdlib.org/mrrc/1
9
BAMS 
 Brain Architecture Management System (BAMS)
 http://brancusi.usc.edu/bkms
10
BCDB 
 Brain Collection Database
 http://www.brains.rad.msu.edu
11
BGED 
 Brain Gene Expression Database
 http://genome.mc.pref.osaka.jp/BGED/
12
BIRN 
 Biomedical Informatics Research Network
 http://www.nbirn.net
13
BIRN-CC 
 BIRN Coordinating Center
 http://www.nbirn.net/TestBeds/CoordinatingCenter/index.htm
14
Brain Atlases 
 Brain atlases
 http://brainmaps.org
15
BrainInfo 
 BrainInfo
 http://braininfo.rprc.washington.edu
16
BrainMap 
 BrainMap
 http://brainmap.org/
17
BrainMaps.org 
 High Resolution Primate Brain atlases integrated with database and search features
 http://brainmaps.org
18
BRAINnet 
 Brain Research And Integrative Neuroscience Network
 http://www.brainnet.net
19
BrainPharm  
 Resource in SenseLab related to pharmacological information related to Alzheimer's Disease, Parkinson's Disease and Epilepsy
 http://senselab.med.yale.edu/BrainPharm/
20
Brainscape 
 A database and analysis engine for exploring resting state fMRI studies
 http://www.brainscape.org
21
BrainWeb 
 BrainWeb
 http://www.bic.mni.mcgill.ca/brainweb/
22
Brede 
 Brede database
 http://hendrix.imm.dtu.dk/services/jerne/brede/
23
CCDB 
 Cell Centered Database
 http://ccdb.ucsd.edu/
24
CellPropDB 
 Database for cell properties
 http://senselab.med.yale.edu/senselab/CellPropDB
25
ChannelDB 
 ChannelDB
 http://www.modelersworkspace.org/channeldb/ChannelDB.html
26
CoCoDat 
 Collation of Cortical (cell and microcircuitry) Data
 http://www.cocomac.org/cocodat
27
CoCoMac 
 Collation of Connectivity data on the Macaque brain
 http://cocomac.org/home.htm
29
Comprehensive Bibliography of Drug Discimination Research 
 Bibliography
 http://dd-database.org
30
Conexus 
 Conexus
 http://mallorn.ucdavis.edu/conexus/
31
Coriell Cell Repositories  
 Resource for distribution of cell cultures and DNA from cell cultures
 http://ccr.coriell.org/ccr/
32
CRCNS 
 Collaborative Research in Computational Neuroscience - Data sharing
 http://crcns.org
33
Cys-Loop Ligand Gated Channels  
 Cys-Loop Ligand Gated Channels
 http://www.gwumc.edu/pharm/cys-loop.htm
34
DOQCS 
 DOQCS: Database of Quantitative Cellular Signaling
 http://doqcs.ncbs.res.in
35
Ear Lab 
 A Digital Warehouse of Auditory Models and Data
 http://earlab.bu.edu/
36
EMAGE  
 EMAGE- Gene Expression Database
 http://genex.hgu.mrc.ac.uk/Emage/database/emageIntro.html
37
EMAP 
 EMAP. Edinburgh mouse atlas project
 http://genex.hgu.mrc.ac.uk/
38
FlyTrap 
 Fly-trap
 http://www.fly-trap.org/
39
FMRIDC 
 The fMRI Data Center
 http://www.fmridc.org
40
FunctionBIRN 
 Function BIRN
 http://www.nbirn.net/TestBeds/Function/index.htm
41
GARAROB 
 Glomerular Activity Response Archive for the Rat Olfactory Bulb
 http://leonserver.bio.uci.edu
42
GENBANK  
 Comperhensive repository of genes at the National Center for Biotechnology Information
 http://www.ncbi.nih.gov/
43
GeneNetwork 
 GeneNetwork is a suite of connected bioinformatic tools and data resources, including genotypes, SNPs, gene expression, anatomical, and behavioral phenotypes for many strains of mice and rats and several CNS regions.
 http://www.genenetwork.org
44
GENSAT  
 Gene Expression Atlas of Mouse Central nervous system
 http://www.gensat.org/
45
gPDB 
 Database related to GPCRs
 http://bioinformatics.biol.uoa.gr/gpDB/
46
HDBase  
 Disseminating information related to Huntington's Disease
 http://hdbase.org/cgi-bin/welcome.cgi
47
Hereditary Hearing Loss Homepage 
 Genetics of hereditary hearing impairment
 http://www.uia.ac.be/dnalab/hhh/
48
Human Protein Reference Database  
 Proteomics aspects of proteins in humans
 http://www.hprd.org/
49
HyperBrain Brain Atlas 
 Brain Atlas in 3 planes some from myelin stained sections, coronal, others from MRI's.
 http://medstat.med.utah.edu/kw/brain_atlas/index.htm
50
IBSR 
 Internet Brain Segmentation Repository (IBSR)
 http://www.cma.mgh.harvard.edu/ibsr/
51
IBVD 
 Internet Brain Volume Database
 http://www.cma.mgh.harvard.edu/ibvd/
52
ICBM 
 International Consortium for brain Mapping
 http://www.loni.ucla.edu/ICBM/
53
ICBM DBs 
 ICBM Databases
 http://www.loni.ucla.edu/ICBM/ICBM_Databases.html
54
ImageBank  
 A Bioscience Image Source
 http://bio.ltsn.ac.uk/imagebank/
55
INDP 
 Identified Neuron Database Project
 http://n002bsel.bios.uic.edu/
56
IUPHAR-DB 
 IUPHAR Database of Receptors and Ion Channels
 http://www.iuphar-db.org
57
Ki-Database 
 Database of Drug-Target Interaction
 http://pdsp.med.unc.edu
58
L-Neuron 
 Computational Neuroanatomy Database
 http://www.krasnow.gmu.edu/L-Neuron
59
Lafora  
 Related to Epilepsy
 http://projects.tcag.ca/lafora/
60
Language Map EMS 
 Language Map Experiment Management System
 http://tela.biostr.washington.edu/cgi-bin/repos/bmap_repo/main-menu.pl
61
LGICdb 
 Ligand Gated Ion Channel database (LGICdb)
 http://www.ebi.ac.uk/compneur-srv/LGICdb/
62
LONI Image Database 
 LONI Image Database
 http://www.loni.ucla.edu/Research/Databases/
63
Lowes Syndrome Mutation Database  
 Information related to mutations related to Lowes Syndeome
 http://research.nhgri.nih.gov/lowe/
64
MAP 
 Mouse Atlas Project
 http://www.loni.ucla.edu/MAP/Atlas/Databases.html
65
MBA 
 Mouse Brain Atlases
 http://www.mbl.org/mbl_main/atlas.html
66
MBL 
 The Mouse Brain Library
 http://mbl.org
67
MCell  
 Simulation studies related to cellular signaling
 http://www.mcell.cnl.salk.edu/
68
MitoMap 
 Human Mitochondrial Genome Database
 http://www.mitomap.org/
69
ModelDB 
 Neuronal and Network Models
 http://senselab.med.yale.edu/senselab/ModelDB/
70
MorphBIRN 
 Morphometry BIRN
 http://www.nbirn.net/TestBeds/Morphometry/index.htm
71
Mouse BIRN 
 Multi-Scale Mouse Models of Disease Test Bed
 http://www.nbirn.net/TestBeds/Mouse/index.htm
72
Mouse Brain Atlas 
 Navigable Atlas of the Mouse Brain
 http://www.hms.harvard.edu/research/brain/atlas.html
73
National Brain Databank  
 Gene Expression Database from Microarray Experiments
 http://132.183.217.124/brainbank/Main
74
National Institute of Neurological Disorders and Stroke  
 Comprehensive resource for information related to neurological disorders
 http://www.ninds.nih.gov/
75
NBD 
 National Brain Databank
 http://national_databank.mclean.org
76
Nclamp 
 Nclamp
 http://www.physiol.ucl.ac.uk/research/silver_a/nclamp/
77
NEIBank 
 National Eye Institute Bank
 http://neibank.nei.nih.gov
78
Nervenet 
 Mouse Neurogenetics Center
 http://www.nervenet.org
79
NeSys 
 Brain Map Transformations in Cerebellar Systems
 http://www.nesys.uio.no
80
Neurodatabase 
 Neurodatabase.org
 http://neurodatabase.org
81
NeuroHomology Database 
 Data on Interspecies Similarities
 http://brancusi.usc.edu/scripts/webmerger.exe?/database/homologies-main.html
82
NeuroMatic 
 NeuroMatic
 http://www.neuromatic.thinkrandom.com/
83
Neuromice 
 Neuromice.org
 http://www.neuromice.org
84
NeuroMorpho.Org 
 Inventory of digital reconstructions of neuronal morphology
 http://www.neuromorpho.org/neuroMorpho/
85
Neuromuscular Disease Center  
 Comprehensive resource related to neuromuscular disorders
 http://www.neuro.wustl.edu/neuromuscular/
86
NeuronDB 
 Database of membrane properties in neuronal compartments
 http://senselab.med.yale.edu/senselab/NeuronDB/default.asp
87
Neurosys 
 Distributed, semi-structured, user-configurable XML Database
 http://neurosys.cns.montana.edu
88
Neuroterrain 
 Neuroinformatic Tools for Vertebrate Brain Mapping
 http://www.neuroterrain.org/
89
NIH Neuroscience Microarray Consortium  
 NIH center for acquisition of genomic data using microarrays
 http://arrayconsortium.tgen.org/np2/
90
NINDS NIMH Microarray Enterprise Manager 
 Microarray data files from experiments
 http://arrayconsortium.tgen.org
91
NTSA 
 NTSA Workbench
 http://soma.npa.uiuc.edu/
92
OASIS 
 The Open Access Series of Imaging Studies
 http://www.oasis-brains.org
93
ODE 
 Ontological Discovery Environment
 http://www.ontologicaldiscovery.org
94
OdorDB 
 Database of odor ligands
 http://senselab.med.yale.edu/senselab/odordb
95
OdorMapDB 
 A data repository for odor maps
 http://senselab.med.yale.edu/senselab/OdorMapDB/default.asp
96
ORDB 
 Olfactory Receptor Database (ORDB)
 http://senselab.med.yale.edu/senselab/ordb/
97
PANTHER  
 Protein ANalysis THrough Evolutionary Relationships
 http://www.pantherdb.org/
98
PDB 
 Protein Data Bank
 http://www.rcsb.org/pdb/
99
PEP  
 Prediction of Entire Proteomes
 http://cubic.bioc.columbia.edu/PEP/
100
PhenoGen Informatics 
 Informatics and statistical tools and gene expression data (including eQTLs) for the analysis of "candidate genes" for complex behavioral traits.
 http://phenogen.uchsc.edu



 
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